Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Prpf40bQ80W14 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf40bQ80W14 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf40bQ80W14 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf40bQ80W14 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.61■□□□□ 0.25
Prpf40bQ80W14 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm12134-201ENSMUST00000122109 520 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm42612-201ENSMUST00000197986 623 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm43170-201ENSMUST00000199827 612 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Gm20445-201ENSMUST00000061905 565 ntBASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf40bQ80W14 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm45668-201ENSMUST00000211271 493 ntBASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Prpf40bQ80W14 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf40bQ80W14 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Prpf40bQ80W14 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Gm4875-201ENSMUST00000118257 786 ntBASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.58■□□□□ 0.24
Prpf40bQ80W14 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Gm15823-201ENSMUST00000064305 670 ntBASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Prpf40bQ80W14 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Prpf40bQ80W14 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms