Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gm17150-201ENSMUST00000165577 381 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Prpf38bQ80SY5 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf38bQ80SY5 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf38bQ80SY5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf38bQ80SY5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Prpf38bQ80SY5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.08■□□□□ 0
Prpf38bQ80SY5 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Gm8318-201ENSMUST00000182954 872 ntBASIC15.08■□□□□ 0
Prpf38bQ80SY5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.08■□□□□ 0
Prpf38bQ80SY5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.07■□□□□ 0
Prpf38bQ80SY5 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Prpf38bQ80SY5 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Gm12138-201ENSMUST00000122180 951 ntBASIC15.06■□□□□ 0
Prpf38bQ80SY5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.06■□□□□ 0
Prpf38bQ80SY5 Gm29541-201ENSMUST00000191351 678 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms