Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nphp3Q7TNH6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Gm15653-201ENSMUST00000119247 907 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Mir1897-201ENSMUST00000122581 272 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Mir7684-201ENSMUST00000183858 60 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Gm27989-201ENSMUST00000184721 107 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 AA619741-201ENSMUST00000195095 646 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Mir125a-201ENSMUST00000083545 68 ntBASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nphp3Q7TNH6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nphp3Q7TNH6 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Nphp3Q7TNH6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Gm15487-201ENSMUST00000122373 465 ntBASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nphp3Q7TNH6 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Nphp3Q7TNH6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms