Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.1□□□□□ -0.63
Notch3Q61982 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm13233-201ENSMUST00000118760 1443 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Gm13244-201ENSMUST00000118855 1446 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm43703-201ENSMUST00000200523 763 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Shd-206ENSMUST00000225145 998 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.09□□□□□ -0.63
Notch3Q61982 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.09□□□□□ -0.63
Notch3Q61982 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Notch3Q61982 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.09□□□□□ -0.63
Notch3Q61982 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Notch3Q61982 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Notch3Q61982 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.08□□□□□ -0.63
Notch3Q61982 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Notch3Q61982 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Notch3Q61982 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Notch3Q61982 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.08□□□□□ -0.64
Notch3Q61982 Gm15321-201ENSMUST00000121290 288 ntBASIC11.08□□□□□ -0.64
Notch3Q61982 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.08□□□□□ -0.64
Notch3Q61982 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.08□□□□□ -0.64
Notch3Q61982 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Gm18062-201ENSMUST00000208020 547 ntBASIC11.08□□□□□ -0.64
Notch3Q61982 Gm18055-201ENSMUST00000208254 547 ntBASIC11.08□□□□□ -0.64
Notch3Q61982 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.08□□□□□ -0.64
Notch3Q61982 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Notch3Q61982 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Notch3Q61982 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Notch3Q61982 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms