Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav5d-4Q5R1F6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav5d-4Q5R1F6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav5d-4Q5R1F6 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm15467-201ENSMUST00000120582 445 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm5479-201ENSMUST00000160578 435 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Gm9182-201ENSMUST00000217829 639 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav5d-4Q5R1F6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Gm14494-201ENSMUST00000118786 435 ntBASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav5d-4Q5R1F6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms