Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm13047-201ENSMUST00000117116 815 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm21470-201ENSMUST00000187680 696 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm19208-201ENSMUST00000213861 912 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Prob1-201ENSMUST00000097619 3021 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Spg11Q3UHA3 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm7857-201ENSMUST00000117957 358 ntBASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Spg11Q3UHA3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm25927-201ENSMUST00000175058 117 ntBASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.1□□□□□ -0.31
Spg11Q3UHA3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Spg11Q3UHA3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms