Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Mzt1-203ENSMUST00000227948 952 ntBASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.92□□□□□ -0.18
Ptchd3Q0EEE2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Gm13036-201ENSMUST00000117799 748 ntBASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Gm11764-201ENSMUST00000120221 623 ntBASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ptchd3Q0EEE2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gm4899-201ENSMUST00000178708 719 ntBASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ptchd3Q0EEE2 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Ptchd3Q0EEE2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ptchd3Q0EEE2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ptchd3Q0EEE2 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms