Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Mospd4-201ENSMUST00000180618 576 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.75□□□□□ -0.37
Chd8Q09XV5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chd8Q09XV5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chd8Q09XV5 Gm19640-201ENSMUST00000214849 464 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.74□□□□□ -0.37
Chd8Q09XV5 Dancr-204ENSMUST00000132389 2347 ntBASIC12.73□□□□□ -0.37
Chd8Q09XV5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.73□□□□□ -0.37
Chd8Q09XV5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chd8Q09XV5 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms