Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 AA414768-201ENSMUST00000121924 1257 ntBASIC12.1□□□□□ -0.47
Npas1P97459 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.1□□□□□ -0.47
Npas1P97459 Gm12497-201ENSMUST00000138778 237 ntBASIC12.1□□□□□ -0.47
Npas1P97459 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.1□□□□□ -0.47
Npas1P97459 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.1□□□□□ -0.47
Npas1P97459 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Npas1P97459 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Npas1P97459 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Npas1P97459 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Npas1P97459 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Npas1P97459 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Paupar-201ENSMUST00000194826 3482 ntBASIC12.09□□□□□ -0.47
Npas1P97459 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Npas1P97459 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Npas1P97459 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Npas1P97459 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.09□□□□□ -0.47
Npas1P97459 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.09□□□□□ -0.47
Npas1P97459 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Npas1P97459 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Npas1P97459 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Npas1P97459 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Npas1P97459 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.09□□□□□ -0.47
Npas1P97459 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.09□□□□□ -0.47
Npas1P97459 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Npas1P97459 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Npas1P97459 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npas1P97459 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npas1P97459 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npas1P97459 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Npas1P97459 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.08□□□□□ -0.48
Npas1P97459 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Npas1P97459 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.08□□□□□ -0.48
Npas1P97459 Gm10499-201ENSMUST00000174094 934 ntBASIC12.08□□□□□ -0.48
Npas1P97459 Gm6659-201ENSMUST00000174752 547 ntBASIC12.08□□□□□ -0.48
Npas1P97459 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Npas1P97459 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.08□□□□□ -0.48
Npas1P97459 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Npas1P97459 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Npas1P97459 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms