Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ldb1P70662 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ldb1P70662 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ldb1P70662 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb1P70662 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.35□□□□□ -0.11
Ldb1P70662 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb1P70662 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.35□□□□□ -0.11
Ldb1P70662 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.35□□□□□ -0.11
Ldb1P70662 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.35□□□□□ -0.11
Ldb1P70662 Gm45612-201ENSMUST00000211320 160 ntBASIC14.35□□□□□ -0.11
Ldb1P70662 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb1P70662 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ldb1P70662 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb1P70662 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.34□□□□□ -0.11
Ldb1P70662 Gm11543-201ENSMUST00000120758 370 ntBASIC14.34□□□□□ -0.11
Ldb1P70662 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Ldb1P70662 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.34□□□□□ -0.11
Ldb1P70662 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.34□□□□□ -0.11
Ldb1P70662 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ldb1P70662 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.34□□□□□ -0.11
Ldb1P70662 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ldb1P70662 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.34□□□□□ -0.11
Ldb1P70662 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb1P70662 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb1P70662 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb1P70662 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.33□□□□□ -0.12
Ldb1P70662 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.33□□□□□ -0.12
Ldb1P70662 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Gm13365-201ENSMUST00000121188 973 ntBASIC14.33□□□□□ -0.12
Ldb1P70662 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
Ldb1P70662 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb1P70662 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb1P70662 Gm18057-201ENSMUST00000208220 503 ntBASIC14.33□□□□□ -0.12
Ldb1P70662 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.33□□□□□ -0.12
Ldb1P70662 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ldb1P70662 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.33□□□□□ -0.12
Ldb1P70662 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb1P70662 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.33□□□□□ -0.12
Ldb1P70662 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ldb1P70662 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms