Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Gabra1P62812 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.13□□□□□ -0.47
Gabra1P62812 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.13□□□□□ -0.47
Gabra1P62812 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Gabra1P62812 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.13□□□□□ -0.47
Gabra1P62812 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.13□□□□□ -0.47
Gabra1P62812 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Gabra1P62812 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Gabra1P62812 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Gabra1P62812 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.12□□□□□ -0.47
Gabra1P62812 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Gabra1P62812 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.12□□□□□ -0.47
Gabra1P62812 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Gm17808-201ENSMUST00000200859 894 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.12□□□□□ -0.47
Gabra1P62812 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Gm8655-201ENSMUST00000221159 852 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.12□□□□□ -0.47
Gabra1P62812 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.12□□□□□ -0.47
Gabra1P62812 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Gabra1P62812 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.12□□□□□ -0.47
Gabra1P62812 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Gabra1P62812 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gabra1P62812 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Gabra1P62812 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.11□□□□□ -0.47
Gabra1P62812 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gabra1P62812 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.11□□□□□ -0.47
Gabra1P62812 Gm15165-201ENSMUST00000118140 502 ntBASIC12.11□□□□□ -0.47
Gabra1P62812 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.11□□□□□ -0.47
Gabra1P62812 Gm10499-201ENSMUST00000174094 934 ntBASIC12.11□□□□□ -0.47
Gabra1P62812 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Gabra1P62812 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Gabra1P62812 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.11□□□□□ -0.47
Gabra1P62812 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.11□□□□□ -0.47
Gabra1P62812 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms