Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lim2P56563 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.42□□□□□ -0.1
Lim2P56563 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.41□□□□□ -0.1
Lim2P56563 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lim2P56563 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.41□□□□□ -0.1
Lim2P56563 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Lim2P56563 Gm37230-201ENSMUST00000194491 818 ntBASIC14.41□□□□□ -0.1
Lim2P56563 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.41□□□□□ -0.1
Lim2P56563 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Lim2P56563 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Lim2P56563 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.41□□□□□ -0.1
Lim2P56563 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lim2P56563 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.4□□□□□ -0.1
Lim2P56563 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.4□□□□□ -0.1
Lim2P56563 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.4□□□□□ -0.1
Lim2P56563 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.4□□□□□ -0.1
Lim2P56563 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lim2P56563 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lim2P56563 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.39□□□□□ -0.11
Lim2P56563 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lim2P56563 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Lim2P56563 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lim2P56563 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lim2P56563 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.39□□□□□ -0.11
Lim2P56563 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.38□□□□□ -0.11
Lim2P56563 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lim2P56563 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Lim2P56563 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.38□□□□□ -0.11
Lim2P56563 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lim2P56563 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.38□□□□□ -0.11
Lim2P56563 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.38□□□□□ -0.11
Lim2P56563 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms