Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.81□□□□□ -0.2
Sox3P53784 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.81□□□□□ -0.2
Sox3P53784 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sox3P53784 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sox3P53784 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Mir1938-201ENSMUST00000158746 100 ntBASIC13.81□□□□□ -0.2
Sox3P53784 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.81□□□□□ -0.2
Sox3P53784 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sox3P53784 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sox3P53784 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.81□□□□□ -0.2
Sox3P53784 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Sox3P53784 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox3P53784 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sox3P53784 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox3P53784 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox3P53784 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.8□□□□□ -0.2
Sox3P53784 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.8□□□□□ -0.2
Sox3P53784 Gm18737-201ENSMUST00000173594 937 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Gm27838-201ENSMUST00000184829 128 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Gm18062-201ENSMUST00000208020 547 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Gm18055-201ENSMUST00000208254 547 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox3P53784 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Gm10154-201ENSMUST00000084445 354 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox3P53784 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.8□□□□□ -0.2
Sox3P53784 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Sox3P53784 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Sox3P53784 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sox3P53784 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Sox3P53784 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sox3P53784 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Sox3P53784 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Sox3P53784 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.79□□□□□ -0.2
Sox3P53784 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox3P53784 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox3P53784 Gm8410-201ENSMUST00000117225 605 ntBASIC13.79□□□□□ -0.2
Sox3P53784 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox3P53784 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.79□□□□□ -0.2
Sox3P53784 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.79□□□□□ -0.2
Sox3P53784 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sox3P53784 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.79□□□□□ -0.2
Sox3P53784 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sox3P53784 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms