Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.94□□□□□ -0.5
Nkx2-1P50220 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-1P50220 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.93□□□□□ -0.5
Nkx2-1P50220 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.93□□□□□ -0.5
Nkx2-1P50220 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nkx2-1P50220 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Nkx2-1P50220 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Nkx2-1P50220 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms