Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Xcl1P47993 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC9.34□□□□□ -0.91
Xcl1P47993 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC9.34□□□□□ -0.91
Xcl1P47993 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC9.34□□□□□ -0.91
Xcl1P47993 Rab3c-203ENSMUST00000224180 967 ntBASIC9.34□□□□□ -0.91
Xcl1P47993 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Xcl1P47993 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Xcl1P47993 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Xcl1P47993 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Xcl1P47993 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC9.34□□□□□ -0.91
Xcl1P47993 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Xcl1P47993 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Xcl1P47993 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Xcl1P47993 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.33□□□□□ -0.92
Xcl1P47993 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.33□□□□□ -0.92
Xcl1P47993 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.33□□□□□ -0.92
Xcl1P47993 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Xcl1P47993 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Xcl1P47993 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Mir6404-201ENSMUST00000183699 94 ntBASIC9.33□□□□□ -0.92
Xcl1P47993 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Xcl1P47993 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.33□□□□□ -0.92
Xcl1P47993 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Xcl1P47993 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 AC154262.2-201ENSMUST00000224310 2293 ntBASIC9.33□□□□□ -0.92
Xcl1P47993 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Xcl1P47993 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Xcl1P47993 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Xcl1P47993 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Xcl1P47993 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms