Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Foxa1P35582 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Foxa1P35582 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Foxa1P35582 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.31□□□□□ -0.28
Foxa1P35582 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Foxa1P35582 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxa1P35582 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.31□□□□□ -0.28
Foxa1P35582 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Foxa1P35582 Gm10275-202ENSMUST00000168697 495 ntBASIC13.31□□□□□ -0.28
Foxa1P35582 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.31□□□□□ -0.28
Foxa1P35582 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxa1P35582 Gm10275-201ENSMUST00000092620 635 ntBASIC13.31□□□□□ -0.28
Foxa1P35582 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Foxa1P35582 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Foxa1P35582 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Foxa1P35582 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Foxa1P35582 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Foxa1P35582 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.3□□□□□ -0.28
Foxa1P35582 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Mir449b-201ENSMUST00000104833 80 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.3□□□□□ -0.28
Foxa1P35582 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
Foxa1P35582 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.3□□□□□ -0.28
Foxa1P35582 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Foxa1P35582 Gm29310-201ENSMUST00000185468 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21825-201ENSMUST00000185728 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm29109-201ENSMUST00000185895 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21896-201ENSMUST00000186520 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21873-201ENSMUST00000186728 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21794-201ENSMUST00000187056 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21880-201ENSMUST00000187275 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21826-201ENSMUST00000187451 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21198-201ENSMUST00000188393 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21749-201ENSMUST00000189343 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21901-201ENSMUST00000189568 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm29424-201ENSMUST00000189716 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm28599-201ENSMUST00000189838 694 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21867-201ENSMUST00000189917 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm29269-201ENSMUST00000190087 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21722-201ENSMUST00000190153 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm28423-201ENSMUST00000190701 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21899-201ENSMUST00000190745 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21910-201ENSMUST00000191163 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21849-201ENSMUST00000191571 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm28678-201ENSMUST00000191593 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm20910-201ENSMUST00000193268 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm21871-201ENSMUST00000194621 696 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Gm5779-201ENSMUST00000218467 910 ntBASIC13.3□□□□□ -0.28
Foxa1P35582 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Foxa1P35582 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms