Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Hmga1P17095 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.65□□□□□ -0.06
Hmga1P17095 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.65□□□□□ -0.06
Hmga1P17095 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.65□□□□□ -0.06
Hmga1P17095 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hmga1P17095 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.65□□□□□ -0.06
Hmga1P17095 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.65□□□□□ -0.06
Hmga1P17095 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Hmga1P17095 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmga1P17095 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Hmga1P17095 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hmga1P17095 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.64□□□□□ -0.07
Hmga1P17095 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Hmga1P17095 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.64□□□□□ -0.07
Hmga1P17095 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hmga1P17095 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.64□□□□□ -0.07
Hmga1P17095 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Hmga1P17095 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hmga1P17095 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Hmga1P17095 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
Hmga1P17095 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Hmga1P17095 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.63□□□□□ -0.07
Hmga1P17095 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.63□□□□□ -0.07
Hmga1P17095 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.63□□□□□ -0.07
Hmga1P17095 Gm28631-201ENSMUST00000190740 334 ntBASIC14.63□□□□□ -0.07
Hmga1P17095 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.63□□□□□ -0.07
Hmga1P17095 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.63□□□□□ -0.07
Hmga1P17095 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hmga1P17095 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Hmga1P17095 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.63□□□□□ -0.07
Hmga1P17095 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hmga1P17095 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.63□□□□□ -0.07
Hmga1P17095 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Hmga1P17095 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Hmga1P17095 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hmga1P17095 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms