Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cntn1P12960 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cntn1P12960 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.82□□□□□ -0.2
Cntn1P12960 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.82□□□□□ -0.2
Cntn1P12960 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Carlr-201ENSMUST00000181515 2574 ntBASIC13.81□□□□□ -0.2
Cntn1P12960 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cntn1P12960 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.81□□□□□ -0.2
Cntn1P12960 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Gm27306-201ENSMUST00000183970 107 ntBASIC13.81□□□□□ -0.2
Cntn1P12960 Gm27989-201ENSMUST00000184721 107 ntBASIC13.81□□□□□ -0.2
Cntn1P12960 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.81□□□□□ -0.2
Cntn1P12960 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cntn1P12960 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.8□□□□□ -0.2
Cntn1P12960 Gm14767-201ENSMUST00000121559 586 ntBASIC13.8□□□□□ -0.2
Cntn1P12960 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.8□□□□□ -0.2
Cntn1P12960 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Shd-206ENSMUST00000225145 998 ntBASIC13.8□□□□□ -0.2
Cntn1P12960 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.8□□□□□ -0.2
Cntn1P12960 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cntn1P12960 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.8□□□□□ -0.2
Cntn1P12960 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.8□□□□□ -0.2
Cntn1P12960 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cntn1P12960 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms