Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ctla2aP12399 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.96□□□□□ -0.33
Ctla2aP12399 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.96□□□□□ -0.33
Ctla2aP12399 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.96□□□□□ -0.33
Ctla2aP12399 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.96□□□□□ -0.33
Ctla2aP12399 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Ctla2aP12399 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ctla2aP12399 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ctla2aP12399 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Ctla2aP12399 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Ctla2aP12399 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ctla2aP12399 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Ctla2aP12399 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ctla2aP12399 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.95□□□□□ -0.34
Ctla2aP12399 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.95□□□□□ -0.34
Ctla2aP12399 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ctla2aP12399 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ctla2aP12399 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.95□□□□□ -0.34
Ctla2aP12399 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Ctla2aP12399 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.95□□□□□ -0.34
Ctla2aP12399 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ctla2aP12399 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ctla2aP12399 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ctla2aP12399 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.94□□□□□ -0.34
Ctla2aP12399 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ctla2aP12399 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ctla2aP12399 Gm11950-201ENSMUST00000121615 838 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms