Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UbbP0CG49 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
UbbP0CG49 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
UbbP0CG49 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
UbbP0CG49 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
UbbP0CG49 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
UbbP0CG49 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UbbP0CG49 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.53□□□□□ -0.4
UbbP0CG49 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.53□□□□□ -0.4
UbbP0CG49 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.53□□□□□ -0.4
UbbP0CG49 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.53□□□□□ -0.4
UbbP0CG49 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UbbP0CG49 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.53□□□□□ -0.4
UbbP0CG49 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.53□□□□□ -0.4
UbbP0CG49 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.53□□□□□ -0.4
UbbP0CG49 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
UbbP0CG49 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.53□□□□□ -0.4
UbbP0CG49 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.53□□□□□ -0.4
UbbP0CG49 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UbbP0CG49 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
UbbP0CG49 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
UbbP0CG49 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UbbP0CG49 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
UbbP0CG49 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.52□□□□□ -0.41
UbbP0CG49 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm7230-201ENSMUST00000173026 815 ntBASIC12.52□□□□□ -0.41
UbbP0CG49 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.52□□□□□ -0.41
UbbP0CG49 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm43347-201ENSMUST00000200226 580 ntBASIC12.52□□□□□ -0.41
UbbP0CG49 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.52□□□□□ -0.41
UbbP0CG49 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.52□□□□□ -0.41
UbbP0CG49 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UbbP0CG49 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.51□□□□□ -0.41
UbbP0CG49 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UbbP0CG49 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
UbbP0CG49 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms