Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.66■□□□□ 0.58
HLA-DRAP01903 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HLA-DRAP01903 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 AC004870.1-201ENST00000315132 882 ntBASIC18.65■□□□□ 0.58
HLA-DRAP01903 LINC00982-205ENST00000420957 435 ntBASIC18.65■□□□□ 0.58
HLA-DRAP01903 ACTG1P4-201ENST00000425123 1122 ntBASIC18.65■□□□□ 0.58
HLA-DRAP01903 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 AC064862.7-201ENST00000604520 867 ntBASIC18.65■□□□□ 0.58
HLA-DRAP01903 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
HLA-DRAP01903 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HLA-DRAP01903 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HLA-DRAP01903 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
HLA-DRAP01903 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.64■□□□□ 0.57
HLA-DRAP01903 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 AC025062.2-201ENST00000605477 670 ntBASIC18.64■□□□□ 0.57
HLA-DRAP01903 AL031008.1-201ENST00000619963 541 ntBASIC18.64■□□□□ 0.57
HLA-DRAP01903 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HLA-DRAP01903 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HLA-DRAP01903 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 AP001094.4-201ENST00000579008 2176 ntBASIC18.63■□□□□ 0.57
HLA-DRAP01903 AC012313.1-201ENST00000593393 3059 ntBASIC18.63■□□□□ 0.57
HLA-DRAP01903 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.63■□□□□ 0.57
HLA-DRAP01903 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HLA-DRAP01903 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.62■□□□□ 0.57
HLA-DRAP01903 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRAP01903 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms