Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm21722-201ENSMUST00000190153 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm28423-201ENSMUST00000190701 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm21899-201ENSMUST00000190745 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm21910-201ENSMUST00000191163 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm21849-201ENSMUST00000191571 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm28678-201ENSMUST00000191593 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm20910-201ENSMUST00000193268 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gm21871-201ENSMUST00000194621 696 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Igh-VJ558P01758 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Gm8584-201ENSMUST00000171982 758 ntBASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Igh-VJ558P01758 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Igh-VJ558P01758 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms