Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.82□□□□□ -0.2
Hcn1O88704 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn1O88704 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn1O88704 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Gm9385-201ENSMUST00000117563 472 ntBASIC13.81□□□□□ -0.2
Hcn1O88704 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.81□□□□□ -0.2
Hcn1O88704 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Gm43575-201ENSMUST00000196420 516 ntBASIC13.81□□□□□ -0.2
Hcn1O88704 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.81□□□□□ -0.2
Hcn1O88704 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.81□□□□□ -0.2
Hcn1O88704 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Matn2-206ENSMUST00000228570 2798 ntBASIC13.81□□□□□ -0.2
Hcn1O88704 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn1O88704 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Hcn1O88704 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hcn1O88704 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hcn1O88704 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hcn1O88704 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.8□□□□□ -0.2
Hcn1O88704 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.8□□□□□ -0.2
Hcn1O88704 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.8□□□□□ -0.2
Hcn1O88704 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Hcn1O88704 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn1O88704 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Gm23935-201ENSMUST00000102303 57 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Gm24270-201ENSMUST00000102326 57 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 Gm24245-201ENSMUST00000157318 57 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Hcn1O88704 Gm43767-201ENSMUST00000198933 381 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Gm45612-201ENSMUST00000211320 160 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.79□□□□□ -0.2
Hcn1O88704 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Hcn1O88704 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Hcn1O88704 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms