Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm38266-201ENSMUST00000194931 421 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm7783-201ENSMUST00000204795 781 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm9182-201ENSMUST00000217829 639 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm9823-201ENSMUST00000051212 327 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm10012-201ENSMUST00000078252 192 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tnfrsf17O88472 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Gm15808-201ENSMUST00000119046 604 ntBASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Gm43818-201ENSMUST00000200605 466 ntBASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tnfrsf17O88472 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Gm27516-201ENSMUST00000184237 98 ntBASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Tnfrsf17O88472 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Tnfrsf17O88472 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms