Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Mmp8O70138 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.54■□□□□ 0.4
Mmp8O70138 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Gm25144-201ENSMUST00000179561 110 ntBASIC17.54■□□□□ 0.4
Mmp8O70138 Gm25352-201ENSMUST00000179815 110 ntBASIC17.54■□□□□ 0.4
Mmp8O70138 Shd-206ENSMUST00000225145 998 ntBASIC17.54■□□□□ 0.4
Mmp8O70138 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Mmp8O70138 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Mmp8O70138 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC17.54■□□□□ 0.4
Mmp8O70138 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Mmp8O70138 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.53■□□□□ 0.4
Mmp8O70138 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 Gm13223-201ENSMUST00000118609 747 ntBASIC17.53■□□□□ 0.4
Mmp8O70138 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.53■□□□□ 0.4
Mmp8O70138 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mmp8O70138 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Mmp8O70138 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Mmp8O70138 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.53■□□□□ 0.4
Mmp8O70138 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.53■□□□□ 0.4
Mmp8O70138 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Mmp8O70138 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Mmp8O70138 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mmp8O70138 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Mmp8O70138 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Mmp8O70138 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Mmp8O70138 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.52■□□□□ 0.4
Mmp8O70138 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.52■□□□□ 0.4
Mmp8O70138 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Mmp8O70138 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.52■□□□□ 0.4
Mmp8O70138 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Mmp8O70138 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Mmp8O70138 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.51■□□□□ 0.39
Mmp8O70138 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Mmp8O70138 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Mmp8O70138 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.51■□□□□ 0.39
Mmp8O70138 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Mmp8O70138 Mir6956-201ENSMUST00000183598 62 ntBASIC17.51■□□□□ 0.39
Mmp8O70138 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Mmp8O70138 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms