Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col15a1O35206 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Col15a1O35206 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.26■□□□□ 0.51
Col15a1O35206 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.26■□□□□ 0.51
Col15a1O35206 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Col15a1O35206 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col15a1O35206 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Gm24196-201ENSMUST00000179161 110 ntBASIC18.26■□□□□ 0.51
Col15a1O35206 Gm27731-201ENSMUST00000185192 107 ntBASIC18.26■□□□□ 0.51
Col15a1O35206 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.26■□□□□ 0.51
Col15a1O35206 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.26■□□□□ 0.51
Col15a1O35206 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.26■□□□□ 0.51
Col15a1O35206 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col15a1O35206 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm24420-201ENSMUST00000176676 59 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.25■□□□□ 0.51
Col15a1O35206 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm27847-201ENSMUST00000183711 107 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 Gm27375-201ENSMUST00000183799 107 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Gm6983-201ENSMUST00000214912 628 ntBASIC18.25■□□□□ 0.51
Col15a1O35206 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col15a1O35206 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col15a1O35206 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col15a1O35206 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.24■□□□□ 0.51
Col15a1O35206 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col15a1O35206 Camk2g-217ENSMUST00000226630 1937 ntBASIC18.24■□□□□ 0.51
Col15a1O35206 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC18.24■□□□□ 0.51
Col15a1O35206 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.24■□□□□ 0.51
Col15a1O35206 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Col15a1O35206 Gm10478-201ENSMUST00000084451 396 ntBASIC18.24■□□□□ 0.51
Col15a1O35206 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col15a1O35206 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC18.23■□□□□ 0.51
Col15a1O35206 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC18.23■□□□□ 0.51
Col15a1O35206 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.23■□□□□ 0.51
Col15a1O35206 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
Col15a1O35206 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col15a1O35206 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms