Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm11424-201ENSMUST00000121929 829 ntBASIC17.13■□□□□ 0.33
Gm4340L7N2C4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4340L7N2C4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.12■□□□□ 0.33
Gm4340L7N2C4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Gm14928-201ENSMUST00000120198 477 ntBASIC17.12■□□□□ 0.33
Gm4340L7N2C4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4340L7N2C4 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gm4804-201ENSMUST00000182234 999 ntBASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gm28631-201ENSMUST00000190740 334 ntBASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4340L7N2C4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4340L7N2C4 Gm5186-201ENSMUST00000218781 920 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms