Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm43399-201ENSMUST00000202546 2374 ntBASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm25990-201ENSMUST00000102440 86 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm7222-201ENSMUST00000117512 906 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm45167-201ENSMUST00000208007 322 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm18246-201ENSMUST00000221023 728 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Trav13-3-201ENSMUST00000117226 336 ntBASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ank2-226ENSMUST00000189368 339 ntBASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm6376-201ENSMUST00000209407 580 ntBASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm10652-201ENSMUST00000199790 2622 ntBASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms