Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm14042-201ENSMUST00000120139 833 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm12350-201ENSMUST00000121208 462 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm16026-204ENSMUST00000162652 683 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gm18195-201ENSMUST00000207604 706 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.81□□□□□ -0.52
Trav18A0A075B656 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.8□□□□□ -0.52
Trav18A0A075B656 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.8□□□□□ -0.52
Trav18A0A075B656 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.8□□□□□ -0.52
Trav18A0A075B656 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.8□□□□□ -0.52
Trav18A0A075B656 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav18A0A075B656 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav18A0A075B656 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms