Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lgr5Q9Z1P4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lgr5Q9Z1P4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gm8463-201ENSMUST00000208573 613 ntBASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gm18027-201ENSMUST00000218947 619 ntBASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gm9899-201ENSMUST00000065519 555 ntBASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lgr5Q9Z1P4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 AY702102-202ENSMUST00000194651 1173 ntBASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Gm18905-201ENSMUST00000205454 928 ntBASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Gm19078-201ENSMUST00000206311 727 ntBASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.1■□□□□ 0.33
Lgr5Q9Z1P4 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms