Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gm4995-201ENSMUST00000117247 432 ntBASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gm25911-201ENSMUST00000157621 56 ntBASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gm20553-201ENSMUST00000204205 844 ntBASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ClcnkaQ9WUB7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm15483-201ENSMUST00000120338 456 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm2451-201ENSMUST00000199447 999 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gm10290-201ENSMUST00000200451 999 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ClcnkaQ9WUB7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ClcnkaQ9WUB7 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms