Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcsQ9WU84 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm12497-201ENSMUST00000138778 237 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Mir6404-201ENSMUST00000183699 94 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm5864-201ENSMUST00000202263 970 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
CcsQ9WU84 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.23□□□□□ -0.61
CcsQ9WU84 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CcsQ9WU84 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 Grk6-205ENSMUST00000224653 2976 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 Gm25406-201ENSMUST00000157599 105 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Gm25745-201ENSMUST00000174945 133 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.22□□□□□ -0.61
CcsQ9WU84 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CcsQ9WU84 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.22□□□□□ -0.61
CcsQ9WU84 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CcsQ9WU84 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms