Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.06□□□□□ -0.16
Cdh17Q9R100 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdh17Q9R100 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.06□□□□□ -0.16
Cdh17Q9R100 Psmb5-202ENSMUST00000227257 622 ntBASIC14.06□□□□□ -0.16
Cdh17Q9R100 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gm7461-201ENSMUST00000058918 827 ntBASIC14.06□□□□□ -0.16
Cdh17Q9R100 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdh17Q9R100 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cdh17Q9R100 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdh17Q9R100 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.05□□□□□ -0.16
Cdh17Q9R100 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cdh17Q9R100 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm10275-202ENSMUST00000168697 495 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm8584-201ENSMUST00000171982 758 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm18733-201ENSMUST00000173950 856 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm10275-201ENSMUST00000092620 635 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.04□□□□□ -0.16
Cdh17Q9R100 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdh17Q9R100 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.03□□□□□ -0.16
Cdh17Q9R100 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.03□□□□□ -0.16
Cdh17Q9R100 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdh17Q9R100 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdh17Q9R100 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdh17Q9R100 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms