Protein–RNA interactions for Protein: Q9D1B9

Mrpl28, 39S ribosomal protein L28, mitochondrial, mousemouse

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl28Q9D1B9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Mrpl28Q9D1B9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Grk6-207ENSMUST00000225925 2769 ntBASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.54□□□□□ -0.4
Mrpl28Q9D1B9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Gm18669-201ENSMUST00000216049 778 ntBASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.53□□□□□ -0.4
Mrpl28Q9D1B9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl28Q9D1B9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl28Q9D1B9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl28Q9D1B9 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl28Q9D1B9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl28Q9D1B9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms