Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Upk1aQ9D132 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.66□□□□□ -0.22
Upk1aQ9D132 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Gm7862-201ENSMUST00000121461 292 ntBASIC13.66□□□□□ -0.22
Upk1aQ9D132 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Gm4899-201ENSMUST00000178708 719 ntBASIC13.66□□□□□ -0.22
Upk1aQ9D132 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Gm7787-201ENSMUST00000216858 688 ntBASIC13.66□□□□□ -0.22
Upk1aQ9D132 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Upk1aQ9D132 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.65□□□□□ -0.22
Upk1aQ9D132 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Upk1aQ9D132 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.64□□□□□ -0.23
Upk1aQ9D132 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Upk1aQ9D132 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms