Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.67□□□□□ -0.06
Cldnd1Q9CQX5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm43094-201ENSMUST00000196549 921 ntBASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cldnd1Q9CQX5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Gm29127-201ENSMUST00000188304 517 ntBASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cldnd1Q9CQX5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cldnd1Q9CQX5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Gm15240-201ENSMUST00000118156 720 ntBASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.64□□□□□ -0.07
Cldnd1Q9CQX5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms