Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nck1Q99M51 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nck1Q99M51 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nck1Q99M51 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Gm8749-201ENSMUST00000117737 331 ntBASIC13.76□□□□□ -0.21
Nck1Q99M51 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nck1Q99M51 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nck1Q99M51 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm13464-201ENSMUST00000119418 935 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm13836-201ENSMUST00000121159 501 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm17807-201ENSMUST00000186869 298 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.75□□□□□ -0.21
Nck1Q99M51 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.75□□□□□ -0.21
Nck1Q99M51 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nck1Q99M51 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Nck1Q99M51 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.74□□□□□ -0.21
Nck1Q99M51 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.74□□□□□ -0.21
Nck1Q99M51 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nck1Q99M51 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.74□□□□□ -0.21
Nck1Q99M51 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nck1Q99M51 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms