Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm5177-201ENSMUST00000183092 997 ntBASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Mir8117-201ENSMUST00000184773 107 ntBASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm37935-201ENSMUST00000192012 982 ntBASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp1b1Q99LU0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp1b1Q99LU0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Chmp1b1Q99LU0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Mir3113-201ENSMUST00000175478 76 ntBASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Chmp1b1Q99LU0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms