Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm15460-201ENSMUST00000118147 391 ntBASIC16.58■□□□□ 0.24
Rfc4Q99J62 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.58■□□□□ 0.24
Rfc4Q99J62 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.58■□□□□ 0.24
Rfc4Q99J62 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rfc4Q99J62 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Gm5354-201ENSMUST00000182417 973 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 Gm9899-201ENSMUST00000065519 555 ntBASIC16.57■□□□□ 0.24
Rfc4Q99J62 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rfc4Q99J62 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.56■□□□□ 0.24
Rfc4Q99J62 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.56■□□□□ 0.24
Rfc4Q99J62 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfc4Q99J62 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.55■□□□□ 0.24
Rfc4Q99J62 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.55■□□□□ 0.24
Rfc4Q99J62 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.55■□□□□ 0.24
Rfc4Q99J62 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfc4Q99J62 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
Rfc4Q99J62 Efs-202ENSMUST00000227037 2540 ntBASIC16.54■□□□□ 0.24
Rfc4Q99J62 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.54■□□□□ 0.24
Rfc4Q99J62 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms