Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Gm7461-201ENSMUST00000058918 827 ntBASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdhb4Q91XZ6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Pcdhb4Q91XZ6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gm8749-201ENSMUST00000117737 331 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gm9726-201ENSMUST00000180321 678 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Gm10154-201ENSMUST00000084445 354 ntBASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.34□□□□□ -0.11
Pcdhb4Q91XZ6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms