Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Gm11478-201ENSMUST00000117851 599 ntBASIC16.47■□□□□ 0.23
Trex1Q91XB0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Gm21470-201ENSMUST00000187680 696 ntBASIC16.47■□□□□ 0.23
Trex1Q91XB0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trex1Q91XB0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.46■□□□□ 0.23
Trex1Q91XB0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.46■□□□□ 0.23
Trex1Q91XB0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Gm19220-201ENSMUST00000222682 803 ntBASIC16.46■□□□□ 0.23
Trex1Q91XB0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Trex1Q91XB0 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.46■□□□□ 0.22
Trex1Q91XB0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trex1Q91XB0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trex1Q91XB0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.45■□□□□ 0.22
Trex1Q91XB0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trex1Q91XB0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Gm11918-201ENSMUST00000121660 179 ntBASIC16.44■□□□□ 0.22
Trex1Q91XB0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Gm43433-201ENSMUST00000196573 481 ntBASIC16.44■□□□□ 0.22
Trex1Q91XB0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.44■□□□□ 0.22
Trex1Q91XB0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trex1Q91XB0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms