Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ndc1Q8VCB1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ndc1Q8VCB1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm13453-201ENSMUST00000118708 357 ntBASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm28630-201ENSMUST00000187806 498 ntBASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gm45098-201ENSMUST00000207179 657 ntBASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ndc1Q8VCB1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.6□□□□□ -0.23
Ndc1Q8VCB1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms