Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Gm5479-201ENSMUST00000160578 435 ntBASIC13.84□□□□□ -0.19
Lsm1Q8VC85 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lsm1Q8VC85 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lsm1Q8VC85 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.83□□□□□ -0.2
Lsm1Q8VC85 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lsm1Q8VC85 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.83□□□□□ -0.2
Lsm1Q8VC85 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.82□□□□□ -0.2
Lsm1Q8VC85 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lsm1Q8VC85 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms