Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cchcr1Q8K2I2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cchcr1Q8K2I2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Gm1401-201ENSMUST00000122048 772 ntBASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cchcr1Q8K2I2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Mir8117-201ENSMUST00000184773 107 ntBASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Gm7461-201ENSMUST00000058918 827 ntBASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cchcr1Q8K2I2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Gm15483-201ENSMUST00000120338 456 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Rpph1-201ENSMUST00000175096 319 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cchcr1Q8K2I2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms