Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm8062-201ENSMUST00000139696 444 ntBASIC16.22■□□□□ 0.19
Syne4Q8CII8 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm2495-201ENSMUST00000191160 466 ntBASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm42693-201ENSMUST00000196779 631 ntBASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm10478-201ENSMUST00000084451 396 ntBASIC16.22■□□□□ 0.19
Syne4Q8CII8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.22■□□□□ 0.19
Syne4Q8CII8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syne4Q8CII8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.21■□□□□ 0.19
Syne4Q8CII8 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm17420-201ENSMUST00000164753 153 ntBASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm37424-201ENSMUST00000191727 561 ntBASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm18905-201ENSMUST00000205454 928 ntBASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syne4Q8CII8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Syne4Q8CII8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syne4Q8CII8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syne4Q8CII8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.2■□□□□ 0.18
Syne4Q8CII8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Gm15429-201ENSMUST00000151268 798 ntBASIC16.2■□□□□ 0.18
Syne4Q8CII8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Gm8463-201ENSMUST00000208573 613 ntBASIC16.2■□□□□ 0.18
Syne4Q8CII8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.2■□□□□ 0.18
Syne4Q8CII8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.2■□□□□ 0.18
Syne4Q8CII8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syne4Q8CII8 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.19■□□□□ 0.18
Syne4Q8CII8 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Gm15240-201ENSMUST00000118156 720 ntBASIC16.19■□□□□ 0.18
Syne4Q8CII8 Gm11814-201ENSMUST00000119515 929 ntBASIC16.19■□□□□ 0.18
Syne4Q8CII8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.19■□□□□ 0.18
Syne4Q8CII8 Snora78-201ENSMUST00000158630 128 ntBASIC16.19■□□□□ 0.18
Syne4Q8CII8 Gm8652-201ENSMUST00000181363 964 ntBASIC16.19■□□□□ 0.18
Syne4Q8CII8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms