Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap1Q8BTW8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap1Q8BTW8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap1Q8BTW8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 AA619741-201ENSMUST00000195095 646 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap1Q8BTW8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm10275-202ENSMUST00000168697 495 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm46209-201ENSMUST00000217912 553 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm10275-201ENSMUST00000092620 635 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap1Q8BTW8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdk5rap1Q8BTW8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms