Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm13297-201ENSMUST00000120205 934 ntBASIC11.98□□□□□ -0.49
Smg1Q8BKX6 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Gm19078-201ENSMUST00000206311 727 ntBASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Gm45098-201ENSMUST00000207179 657 ntBASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smg1Q8BKX6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm15429-201ENSMUST00000151268 798 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm4804-201ENSMUST00000182234 999 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm9368-201ENSMUST00000219348 831 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Snord83b-201ENSMUST00000104546 94 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smg1Q8BKX6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smg1Q8BKX6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm8566-201ENSMUST00000120174 465 ntBASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm17376-201ENSMUST00000166016 84 ntBASIC11.96□□□□□ -0.5
Smg1Q8BKX6 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Proscos-202ENSMUST00000178990 666 ntBASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm33320-201ENSMUST00000192232 530 ntBASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Smg1Q8BKX6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Smg1Q8BKX6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms