Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Samm50Q8BGH2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.92■□□□□ 0.3
Samm50Q8BGH2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Gm10154-201ENSMUST00000084445 354 ntBASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Samm50Q8BGH2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Gm15427-201ENSMUST00000117288 531 ntBASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Gm2272-201ENSMUST00000194903 582 ntBASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Samm50Q8BGH2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Gm23935-201ENSMUST00000102303 57 ntBASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Gm24270-201ENSMUST00000102326 57 ntBASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Gm16198-201ENSMUST00000118766 670 ntBASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Gm24245-201ENSMUST00000157318 57 ntBASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Samm50Q8BGH2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Samm50Q8BGH2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms