Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim6Q8BGE7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim6Q8BGE7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim6Q8BGE7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim6Q8BGE7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trim6Q8BGE7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm11764-201ENSMUST00000120221 623 ntBASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm43347-201ENSMUST00000200226 580 ntBASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.33■□□□□ 0.04
Trim6Q8BGE7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim6Q8BGE7 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim6Q8BGE7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms