Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Gm24543-201ENSMUST00000103867 82 ntBASIC14.92□□□□□ -0.02
Trim62Q80V85 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Gm27622-201ENSMUST00000183779 60 ntBASIC14.92□□□□□ -0.02
Trim62Q80V85 Gm28630-201ENSMUST00000187806 498 ntBASIC14.92□□□□□ -0.02
Trim62Q80V85 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim62Q80V85 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.92□□□□□ -0.02
Trim62Q80V85 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim62Q80V85 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Gm15653-201ENSMUST00000119247 907 ntBASIC14.91□□□□□ -0.02
Trim62Q80V85 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.91□□□□□ -0.02
Trim62Q80V85 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.91□□□□□ -0.02
Trim62Q80V85 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim62Q80V85 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trim62Q80V85 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim62Q80V85 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim62Q80V85 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim62Q80V85 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Mir6956-201ENSMUST00000183598 62 ntBASIC14.9□□□□□ -0.02
Trim62Q80V85 Gm27631-201ENSMUST00000184163 466 ntBASIC14.9□□□□□ -0.02
Trim62Q80V85 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim62Q80V85 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.9□□□□□ -0.02
Trim62Q80V85 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim62Q80V85 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim62Q80V85 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms